STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY48020.1PFAM: Domain of unknown function (DUF3598). (272 aa)    
Predicted Functional Partners:
AFY51054.1
PFAM: Phycobilisome protein; Phycobilisome Linker polypeptide; Belongs to the phycobilisome linker protein family.
  
     0.732
AFY49830.1
Putative hydrolase or acyltransferase of alpha/beta superfamily.
  
     0.700
AFY45967.1
Ribosomal protein L25 (general stress protein Ctc); PFAM: Ribosomal L25p family; Belongs to the bacterial ribosomal protein bL25 family.
  
     0.673
cpcT
CpeT/CpcT family (DUF1001); Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.656
AFY51165.1
TIGRFAM: photosystem II protein PsbQ.
  
     0.636
AFY48083.1
Hypothetical protein.
  
     0.628
AFY49729.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily.
  
     0.623
AFY49410.1
Putative RNA-binding protein (contains KH domain).
  
     0.613
AFY49944.1
PFAM: PBS lyase HEAT-like repeat.
  
     0.609
AFY49943.1
HEAT repeat-containing protein; PFAM: PBS lyase HEAT-like repeat.
  
     0.605
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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