STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY48178.1PFAM: Protein kinase domain. (564 aa)    
Predicted Functional Partners:
AFY50515.1
PFAM: Protein phosphatase 2C.
  
   0.809
AFY50925.1
PFAM: Protein phosphatase 2C.
  
   0.806
AFY50090.1
PFAM: Protein phosphatase 2C.
  
   0.804
AFY45973.1
PFAM: Protein phosphatase 2C.
  
   0.803
AFY48179.1
PFAM: Protein kinase domain.
 
    
0.531
AFY48177.1
Coenzyme F390 synthetase.
       0.530
AFY49610.1
PFAM: Protein kinase domain; FHA domain.
  
 
  
0.422
AFY48176.1
TIGRFAM: conserved hypothetical protein (putative transposase or invertase).
       0.411
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.