Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY48493.1 | AFY48494.1 | Nos7524_2660 | Nos7524_2661 | Hypothetical protein. | PFAM: Predicted membrane protein (DUF2254). | 0.788 |
AFY48493.1 | AFY48495.1 | Nos7524_2660 | Nos7524_2662 | Hypothetical protein. | PFAM: Mechanosensitive ion channel. | 0.773 |
AFY48493.1 | AFY48496.1 | Nos7524_2660 | Nos7524_2663 | Hypothetical protein. | Putative methyltransferase; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase. | 0.403 |
AFY48494.1 | AFY48493.1 | Nos7524_2661 | Nos7524_2660 | PFAM: Predicted membrane protein (DUF2254). | Hypothetical protein. | 0.788 |
AFY48494.1 | AFY48495.1 | Nos7524_2661 | Nos7524_2662 | PFAM: Predicted membrane protein (DUF2254). | PFAM: Mechanosensitive ion channel. | 0.864 |
AFY48494.1 | AFY48496.1 | Nos7524_2661 | Nos7524_2663 | PFAM: Predicted membrane protein (DUF2254). | Putative methyltransferase; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase. | 0.481 |
AFY48495.1 | AFY48493.1 | Nos7524_2662 | Nos7524_2660 | PFAM: Mechanosensitive ion channel. | Hypothetical protein. | 0.773 |
AFY48495.1 | AFY48494.1 | Nos7524_2662 | Nos7524_2661 | PFAM: Mechanosensitive ion channel. | PFAM: Predicted membrane protein (DUF2254). | 0.864 |
AFY48495.1 | AFY48496.1 | Nos7524_2662 | Nos7524_2663 | PFAM: Mechanosensitive ion channel. | Putative methyltransferase; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase. | 0.403 |
AFY48496.1 | AFY48493.1 | Nos7524_2663 | Nos7524_2660 | Putative methyltransferase; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase. | Hypothetical protein. | 0.403 |
AFY48496.1 | AFY48494.1 | Nos7524_2663 | Nos7524_2661 | Putative methyltransferase; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase. | PFAM: Predicted membrane protein (DUF2254). | 0.481 |
AFY48496.1 | AFY48495.1 | Nos7524_2663 | Nos7524_2662 | Putative methyltransferase; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase. | PFAM: Mechanosensitive ion channel. | 0.403 |