Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY46609.1 | AFY47820.1 | Nos7524_0703 | Nos7524_1961 | Hypothetical protein. | PFAM: Cytochrome P450. | 0.588 |
AFY46609.1 | AFY48529.1 | Nos7524_0703 | Nos7524_2696 | Hypothetical protein. | Putative transcriptional regulator; PFAM: Helix-turn-helix; manually curated. | 0.597 |
AFY46609.1 | AFY49763.1 | Nos7524_0703 | Nos7524_3990 | Hypothetical protein. | Putative transmembrane sensor domain protein; PFAM: CHASE2 domain. | 0.619 |
AFY46878.1 | AFY47820.1 | Nos7524_0982 | Nos7524_1961 | Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase. | PFAM: Cytochrome P450. | 0.733 |
AFY46878.1 | AFY48529.1 | Nos7524_0982 | Nos7524_2696 | Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase. | Putative transcriptional regulator; PFAM: Helix-turn-helix; manually curated. | 0.517 |
AFY46941.1 | AFY48529.1 | Nos7524_1047 | Nos7524_2696 | PFAM: Response regulator receiver domain. | Putative transcriptional regulator; PFAM: Helix-turn-helix; manually curated. | 0.571 |
AFY47820.1 | AFY46609.1 | Nos7524_1961 | Nos7524_0703 | PFAM: Cytochrome P450. | Hypothetical protein. | 0.588 |
AFY47820.1 | AFY46878.1 | Nos7524_1961 | Nos7524_0982 | PFAM: Cytochrome P450. | Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase. | 0.733 |
AFY47820.1 | AFY48529.1 | Nos7524_1961 | Nos7524_2696 | PFAM: Cytochrome P450. | Putative transcriptional regulator; PFAM: Helix-turn-helix; manually curated. | 0.517 |
AFY47820.1 | AFY49763.1 | Nos7524_1961 | Nos7524_3990 | PFAM: Cytochrome P450. | Putative transmembrane sensor domain protein; PFAM: CHASE2 domain. | 0.433 |
AFY48527.1 | AFY48528.1 | Nos7524_2694 | Nos7524_2695 | Hypothetical protein. | Hypothetical protein. | 0.778 |
AFY48527.1 | AFY48529.1 | Nos7524_2694 | Nos7524_2696 | Hypothetical protein. | Putative transcriptional regulator; PFAM: Helix-turn-helix; manually curated. | 0.530 |
AFY48527.1 | AFY48530.1 | Nos7524_2694 | Nos7524_2697 | Hypothetical protein. | Transposase, IS605 OrfB family, central region; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region. | 0.530 |
AFY48527.1 | AFY48531.1 | Nos7524_2694 | Nos7524_2698 | Hypothetical protein. | PFAM: Acetyltransferase (GNAT) family. | 0.530 |
AFY48528.1 | AFY48527.1 | Nos7524_2695 | Nos7524_2694 | Hypothetical protein. | Hypothetical protein. | 0.778 |
AFY48528.1 | AFY48529.1 | Nos7524_2695 | Nos7524_2696 | Hypothetical protein. | Putative transcriptional regulator; PFAM: Helix-turn-helix; manually curated. | 0.530 |
AFY48528.1 | AFY48530.1 | Nos7524_2695 | Nos7524_2697 | Hypothetical protein. | Transposase, IS605 OrfB family, central region; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region. | 0.530 |
AFY48528.1 | AFY48531.1 | Nos7524_2695 | Nos7524_2698 | Hypothetical protein. | PFAM: Acetyltransferase (GNAT) family. | 0.530 |
AFY48529.1 | AFY46609.1 | Nos7524_2696 | Nos7524_0703 | Putative transcriptional regulator; PFAM: Helix-turn-helix; manually curated. | Hypothetical protein. | 0.597 |
AFY48529.1 | AFY46878.1 | Nos7524_2696 | Nos7524_0982 | Putative transcriptional regulator; PFAM: Helix-turn-helix; manually curated. | Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase. | 0.517 |
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