STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY48605.1Hypothetical protein. (493 aa)    
Predicted Functional Partners:
AFY48331.1
PFAM: Protein of unknown function (DUF3120).
  
     0.767
AFY46859.1
Molecular chaperone GrpE (heat shock protein); PFAM: GrpE.
  
     0.753
AFY50059.1
Hypothetical protein.
  
     0.746
AFY48944.1
Hypothetical protein.
 
     0.743
AFY50012.1
Hypothetical protein.
  
     0.717
AFY48043.1
SH3 domain-containing protein; PFAM: Bacterial SH3 domain.
  
     0.697
AFY50129.1
PFAM: Acetyltransferase (GNAT) family.
  
     0.686
AFY50164.1
NTF2 domain-containing protein.
  
     0.655
AFY48868.1
DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase.
 
     0.644
AFY50163.1
PFAM: Orange carotenoid protein, N-terminal; Belongs to the orange carotenoid-binding protein family.
  
     0.635
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.