STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY48813.1ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component. (461 aa)    
Predicted Functional Partners:
AFY48812.1
Nitrate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein.
 
 
 0.992
AFY48810.1
PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D.
 
 0.983
AFY48811.1
PFAM: ABC transporter; NMT1/THI5 like; TIGRFAM: nitrate transport ATP-binding subunits C and D.
 
 
0.963
AFY46961.1
Nitrate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein.
 
  
 0.872
AFY50098.1
PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D.
  
 0.862
AFY46959.1
PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D.
  
 0.860
AFY50100.1
Nitrate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein.
 
  
 0.859
AFY50644.1
PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D.
  
 0.854
AFY50645.1
Nitrate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein.
 
  
 0.851
AFY51272.1
Hypothetical protein.
 
  
 0.851
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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