Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY46138.1 | AFY47026.1 | Nos7524_0216 | Nos7524_1134 | Hypothetical protein. | Hypothetical protein. | 0.693 |
AFY46138.1 | AFY47287.1 | Nos7524_0216 | Nos7524_1408 | Hypothetical protein. | Hypothetical protein. | 0.656 |
AFY46138.1 | AFY48929.1 | Nos7524_0216 | Nos7524_3126 | Hypothetical protein. | Lactoylglutathione lyase-like lyase. | 0.556 |
AFY46138.1 | AFY49527.1 | Nos7524_0216 | Nos7524_3747 | Hypothetical protein. | Hypothetical protein. | 0.524 |
AFY46138.1 | AFY50251.1 | Nos7524_0216 | Nos7524_4499 | Hypothetical protein. | Hypothetical protein. | 0.708 |
AFY46138.1 | psbM | Nos7524_0216 | Nos7524_0368 | Hypothetical protein. | Photosystem II reaction center protein PsbM; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface. | 0.427 |
AFY47026.1 | AFY46138.1 | Nos7524_1134 | Nos7524_0216 | Hypothetical protein. | Hypothetical protein. | 0.693 |
AFY47026.1 | AFY48929.1 | Nos7524_1134 | Nos7524_3126 | Hypothetical protein. | Lactoylglutathione lyase-like lyase. | 0.657 |
AFY47026.1 | AFY49527.1 | Nos7524_1134 | Nos7524_3747 | Hypothetical protein. | Hypothetical protein. | 0.678 |
AFY47026.1 | AFY50251.1 | Nos7524_1134 | Nos7524_4499 | Hypothetical protein. | Hypothetical protein. | 0.629 |
AFY47287.1 | AFY46138.1 | Nos7524_1408 | Nos7524_0216 | Hypothetical protein. | Hypothetical protein. | 0.656 |
AFY47287.1 | AFY48929.1 | Nos7524_1408 | Nos7524_3126 | Hypothetical protein. | Lactoylglutathione lyase-like lyase. | 0.590 |
AFY47287.1 | AFY50251.1 | Nos7524_1408 | Nos7524_4499 | Hypothetical protein. | Hypothetical protein. | 0.412 |
AFY48395.1 | AFY48929.1 | Nos7524_2557 | Nos7524_3126 | Hypothetical protein. | Lactoylglutathione lyase-like lyase. | 0.587 |
AFY48395.1 | AFY50251.1 | Nos7524_2557 | Nos7524_4499 | Hypothetical protein. | Hypothetical protein. | 0.582 |
AFY48928.1 | AFY48929.1 | Nos7524_3125 | Nos7524_3126 | PAS domain S-box; PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. | Lactoylglutathione lyase-like lyase. | 0.620 |
AFY48928.1 | AFY48930.1 | Nos7524_3125 | Nos7524_3127 | PAS domain S-box; PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. | Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.440 |
AFY48929.1 | AFY46138.1 | Nos7524_3126 | Nos7524_0216 | Lactoylglutathione lyase-like lyase. | Hypothetical protein. | 0.556 |
AFY48929.1 | AFY47026.1 | Nos7524_3126 | Nos7524_1134 | Lactoylglutathione lyase-like lyase. | Hypothetical protein. | 0.657 |
AFY48929.1 | AFY47287.1 | Nos7524_3126 | Nos7524_1408 | Lactoylglutathione lyase-like lyase. | Hypothetical protein. | 0.590 |
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