STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY48952.1Hypothetical protein. (130 aa)    
Predicted Functional Partners:
AFY48954.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
     0.801
AFY48953.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
 
     0.644
AFY49772.1
PFAM: Protein of unknown function (DUF2834).
  
     0.591
AFY47571.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; PFAM: GSPII_E N-terminal domain.
  
     0.536
AFY48216.1
Hypothetical protein.
  
     0.532
AFY47941.1
GAF domain-containing protein; PFAM: GAF domain.
  
     0.519
AFY51258.1
PFAM: Calcineurin-like phosphoesterase.
  
     0.512
AFY46411.1
Hypothetical protein.
  
     0.504
AFY51171.1
Hypothetical protein.
  
     0.495
AFY46660.1
Chlorophyllase.
  
     0.492
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.