Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFY49006.1PFAM: Phage tail sheath protein. (366 aa)    
Predicted Functional Partners:
AFY47149.1
Phage baseplate assembly protein W; PFAM: Gene 25-like lysozyme.
 
 
 0.984
AFY47151.1
Phage protein D; PFAM: Phage late control gene D protein (GPD).
 
 
 0.984
AFY47146.1
PFAM: Phage tail protein (Tail_P2_I); TIGRFAM: phage tail protein domain; phage tail protein, P2 protein I family.
 
 
 0.958
AFY47154.1
PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein.
 
 
 0.924
AFY47156.1
PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein.
 
 
 0.924
AFY47152.1
LysM domain-containing protein; PFAM: LysM domain.
 
 
 0.915
AFY47147.1
PFAM: Baseplate J-like protein.
 
 
 0.913
AFY47148.1
PFAM: Baseplate J-like protein; TIGRFAM: conserved hypothetical protein, phage tail-like region.
 
 
 0.906
AFY47160.1
Hypothetical protein.
 
 
 
 0.879
AFY49018.1
PFAM: Baseplate J-like protein.
 
 
 0.848
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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