Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFY49007.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
AFY49008.1
Hypothetical protein.
       0.746
AFY49006.1
PFAM: Phage tail sheath protein.
       0.705
AFY49004.1
PFAM: Phage tail sheath protein.
       0.452
AFY49005.1
PFAM: Transposase IS66 family.
       0.452
AFY48999.1
Hypothetical protein.
       0.449
AFY49000.1
Hypothetical protein.
       0.449
AFY49001.1
Hypothetical protein.
       0.449
AFY49002.1
Hypothetical protein.
       0.449
AFY49003.1
Hypothetical protein.
       0.449
AFY49009.1
Hypothetical protein.
       0.420
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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