STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY49138.1Putative membrane protein. (557 aa)    
Predicted Functional Partners:
AFY45971.1
Hypothetical protein.
  
     0.587
AFY47897.1
PFAM: Alpha/beta hydrolase of unknown function (DUF1400).
  
     0.582
AFY47270.1
Hypothetical protein.
  
     0.561
hetR
Peptidase family S48; Controls heterocyst differentiation. Has both a protease and a DNA-binding activity; Belongs to the peptidase S48 family.
  
     0.538
AFY46951.1
Hypothetical protein.
  
     0.532
AFY49136.1
RecF/RecN/SMC N-terminal domain-containing protein; PFAM: RecF/RecN/SMC N terminal domain.
       0.522
AFY49137.1
Hypothetical protein.
       0.522
AFY47006.1
Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
  
     0.499
AFY48537.1
Hypothetical protein.
  
     0.495
AFY47717.1
Hypothetical protein.
  
     0.475
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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