Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY46036.1 | AFY49156.1 | Nos7524_0112 | Nos7524_3361 | PFAM: Protein of unknown function (DUF1257). | Putative membrane protein; PFAM: EamA-like transporter family; manually curated. | 0.438 |
AFY46796.1 | AFY49156.1 | Nos7524_0897 | Nos7524_3361 | Putative membrane protein; PFAM: TM2 domain. | Putative membrane protein; PFAM: EamA-like transporter family; manually curated. | 0.476 |
AFY48249.1 | AFY49156.1 | Nos7524_2407 | Nos7524_3361 | Parallel beta-helix repeat (two copies); PFAM: Protein of unknown function (DUF1565); TIGRFAM: parallel beta-helix repeat (two copies). | Putative membrane protein; PFAM: EamA-like transporter family; manually curated. | 0.416 |
AFY49156.1 | AFY46036.1 | Nos7524_3361 | Nos7524_0112 | Putative membrane protein; PFAM: EamA-like transporter family; manually curated. | PFAM: Protein of unknown function (DUF1257). | 0.438 |
AFY49156.1 | AFY46796.1 | Nos7524_3361 | Nos7524_0897 | Putative membrane protein; PFAM: EamA-like transporter family; manually curated. | Putative membrane protein; PFAM: TM2 domain. | 0.476 |
AFY49156.1 | AFY48249.1 | Nos7524_3361 | Nos7524_2407 | Putative membrane protein; PFAM: EamA-like transporter family; manually curated. | Parallel beta-helix repeat (two copies); PFAM: Protein of unknown function (DUF1565); TIGRFAM: parallel beta-helix repeat (two copies). | 0.416 |
AFY49156.1 | AFY49157.1 | Nos7524_3361 | Nos7524_3362 | Putative membrane protein; PFAM: EamA-like transporter family; manually curated. | Hypothetical protein. | 0.404 |
AFY49157.1 | AFY49156.1 | Nos7524_3362 | Nos7524_3361 | Hypothetical protein. | Putative membrane protein; PFAM: EamA-like transporter family; manually curated. | 0.404 |