STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY49242.1PFAM: Protein of unknown function (DUF3531). (150 aa)    
Predicted Functional Partners:
AFY49243.1
ADP-ribose pyrophosphatase; PFAM: NUDIX domain.
       0.781
AFY50896.1
Hypothetical protein.
  
     0.760
AFY48798.1
PFAM: PRC-barrel domain.
  
     0.757
AFY48565.1
PFAM: Chlorophyll A-B binding protein.
  
     0.753
AFY49876.1
PFAM: Protein of unknown function (DUF2854).
  
     0.740
AFY48374.1
PFAM: Protein of unknown function (DUF3119).
  
     0.739
AFY49398.1
Hypothetical protein.
  
     0.737
AFY49622.1
Hypothetical protein.
  
     0.736
AFY49240.1
ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter.
 
     0.734
AFY49241.1
PFAM: Tetratricopeptide repeat.
 
     0.732
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.