STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY49293.1Lignostilbene-alpha,beta-dioxygenase-like enzyme; PFAM: Retinal pigment epithelial membrane protein. (499 aa)    
Predicted Functional Partners:
AFY46523.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; PFAM: Phospholipase D Active site motif; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region.
  
  
  0.618
AFY48496.1
Putative methyltransferase; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase.
  
   
 0.490
AFY49294.1
PFAM: BT1 family; TIGRFAM: folate/biopterin transporter.
       0.490
AFY49292.1
PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.453
AFY47519.1
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase; PFAM: Class II Aldolase and Adducin N-terminal domain.
  
     0.405
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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