STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY49307.1Hypothetical protein. (115 aa)    
Predicted Functional Partners:
AFY49323.1
Hypothetical protein.
  
     0.774
AFY46753.1
PFAM: Protein of unknown function (DUF3318).
  
     0.704
AFY50814.1
Hypothetical protein.
  
     0.701
AFY46126.1
Hypothetical protein.
  
     0.699
xseB
Exonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
     0.683
AFY50271.1
Hypothetical protein.
  
     0.678
AFY51116.1
Hypothetical protein.
  
     0.650
AFY49324.1
PFAM: Protein of unknown function (DUF2949).
  
     0.635
AFY49862.1
RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4.
  
     0.609
AFY48735.1
Hypothetical protein.
  
     0.607
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.