node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY49395.1 | rimM | Nos7524_3605 | Nos7524_5305 | Putative metal-binding protein, possibly nucleic-acid binding protein; PFAM: Uncharacterized ACR, COG1399. | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.825 |
AFY49395.1 | rplK | Nos7524_3605 | Nos7524_2800 | Putative metal-binding protein, possibly nucleic-acid binding protein; PFAM: Uncharacterized ACR, COG1399. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.819 |
AFY49395.1 | rplS | Nos7524_3605 | Nos7524_2796 | Putative metal-binding protein, possibly nucleic-acid binding protein; PFAM: Uncharacterized ACR, COG1399. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.822 |
AFY49395.1 | rpmF | Nos7524_3605 | Nos7524_1601 | Putative metal-binding protein, possibly nucleic-acid binding protein; PFAM: Uncharacterized ACR, COG1399. | PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.930 |
AFY49395.1 | rpmI | Nos7524_3605 | Nos7524_4557 | Putative metal-binding protein, possibly nucleic-acid binding protein; PFAM: Uncharacterized ACR, COG1399. | PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.822 |
AFY49395.1 | rpsB | Nos7524_3605 | Nos7524_0214 | Putative metal-binding protein, possibly nucleic-acid binding protein; PFAM: Uncharacterized ACR, COG1399. | PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family. | 0.825 |
AFY49395.1 | rpsC | Nos7524_3605 | Nos7524_4933 | Putative metal-binding protein, possibly nucleic-acid binding protein; PFAM: Uncharacterized ACR, COG1399. | Ribosomal protein S3, bacterial type; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.950 |
AFY49395.1 | rpsF | Nos7524_3605 | Nos7524_0203 | Putative metal-binding protein, possibly nucleic-acid binding protein; PFAM: Uncharacterized ACR, COG1399. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.827 |
AFY49395.1 | rpsP | Nos7524_3605 | Nos7524_3624 | Putative metal-binding protein, possibly nucleic-acid binding protein; PFAM: Uncharacterized ACR, COG1399. | PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.827 |
AFY49395.1 | trmD | Nos7524_3605 | Nos7524_4854 | Putative metal-binding protein, possibly nucleic-acid binding protein; PFAM: Uncharacterized ACR, COG1399. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.826 |
rimM | AFY49395.1 | Nos7524_5305 | Nos7524_3605 | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | Putative metal-binding protein, possibly nucleic-acid binding protein; PFAM: Uncharacterized ACR, COG1399. | 0.825 |
rimM | rplK | Nos7524_5305 | Nos7524_2800 | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.813 |
rimM | rplS | Nos7524_5305 | Nos7524_2796 | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.897 |
rimM | rpmF | Nos7524_5305 | Nos7524_1601 | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.818 |
rimM | rpmI | Nos7524_5305 | Nos7524_4557 | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.461 |
rimM | rpsB | Nos7524_5305 | Nos7524_0214 | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family. | 0.875 |
rimM | rpsC | Nos7524_5305 | Nos7524_4933 | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | Ribosomal protein S3, bacterial type; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.807 |
rimM | rpsF | Nos7524_5305 | Nos7524_0203 | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.884 |
rimM | rpsP | Nos7524_5305 | Nos7524_3624 | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.907 |
rimM | trmD | Nos7524_5305 | Nos7524_4854 | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.887 |