STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY49811.1PFAM: Protein of unknown function (DUF820). (209 aa)    
Predicted Functional Partners:
AFY47106.1
PFAM: Protein of unknown function (DUF820).
  
   
 0.786
AFY50617.1
PFAM: Protein of unknown function (DUF820).
  
   
 0.778
AFY49810.1
Hypothetical protein.
       0.737
AFY50948.1
PFAM: Protein of unknown function (DUF820).
  
     0.687
AFY49932.1
PFAM: Protein of unknown function (DUF820).
  
     0.685
AFY46432.1
PFAM: Protein of unknown function (DUF820).
  
     0.679
AFY50364.1
PFAM: Protein of unknown function (DUF820).
  
     0.664
AFY49784.1
PFAM: Protein of unknown function (DUF820).
  
     0.645
AFY49809.1
Cysteine desulfurase-like protein, SufS subfamily; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
       0.631
AFY48352.1
PFAM: Protein of unknown function (DUF820).
  
     0.605
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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