STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQW26422.1Conjugal transfer protein TrbD; Derived by automated computational analysis using gene prediction method: Protein Homology. (99 aa)    
Predicted Functional Partners:
OQW26417.1
Conjugal transfer protein TrbI; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.889
OQW26421.1
Type IV secretion system ATPase VirB4 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.888
OQW26416.1
P-type conjugative transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.877
OQW26423.1
Conjugal transfer protein TrbC; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.871
OQW26420.1
Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.868
trbG
P-type conjugative transfer protein TrbG; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.865
trbB
P-type conjugative transfer ATPase TrbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.861
trbL
P-type conjugative transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.842
OQW26418.1
Conjugal transfer protein TrbH; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.835
OQW26425.1
Carbon storage regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CsrA/RsmA family.
       0.679
Your Current Organism:
Legionella anisa
NCBI taxonomy Id: 28082
Other names: ATCC 35292, ATCC:35292D-5, CCUG 29665, CIP 103870, DSM 17627, JCM 7573, L. anisa, NCTC 11974, strain WA-316-C3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.