STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argGArgininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (402 aa)    
Predicted Functional Partners:
argH
Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
argF
Ornithine carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
carB
Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarB family.
 
 
 0.985
argD
Aspartate aminotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
 
 0.974
argR
ArgR family transcriptional regulator; Regulates arginine biosynthesis genes.
  
  
 0.958
OQW28244.1
Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.924
lysA
Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.872
argE
Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.871
argE-2
Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.871
carA
Molecular chaperone DnaJ; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarA family.
  
 
 0.855
Your Current Organism:
Legionella anisa
NCBI taxonomy Id: 28082
Other names: ATCC 35292, ATCC:35292D-5, CCUG 29665, CIP 103870, DSM 17627, JCM 7573, L. anisa, NCTC 11974, strain WA-316-C3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.