Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OQW29225.1 | OQW29226.1 | A6J39_16140 | A6J39_16145 | Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.479 |
OQW29225.1 | OQW29227.1 | A6J39_16140 | A6J39_16150 | Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.462 |
OQW29225.1 | corA | A6J39_16140 | A6J39_06155 | Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family. | 0.409 |
OQW29226.1 | OQW29225.1 | A6J39_16145 | A6J39_16140 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.479 |
OQW29226.1 | OQW29227.1 | A6J39_16145 | A6J39_16150 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.492 |
OQW29227.1 | OQW29225.1 | A6J39_16150 | A6J39_16140 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.462 |
OQW29227.1 | OQW29226.1 | A6J39_16150 | A6J39_16145 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.492 |
corA | OQW29225.1 | A6J39_06155 | A6J39_16140 | Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family. | Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.409 |