Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lbir_0264 | Lbir_0265 | Lbir_0264 | Lbir_0265 | Hypothetical protein. | Hypothetical protein. | 0.429 |
| Lbir_0265 | Lbir_0264 | Lbir_0265 | Lbir_0264 | Hypothetical protein. | Hypothetical protein. | 0.429 |
| Lbir_0265 | Lbir_0268 | Lbir_0265 | Lbir_0268 | Hypothetical protein. | Putative FlgJ-like protein. | 0.422 |
| Lbir_0265 | Lbir_0269 | Lbir_0265 | Lbir_0269 | Hypothetical protein. | Transcription factor. | 0.412 |
| Lbir_0265 | def_4 | Lbir_0265 | Lbir_0267 | Hypothetical protein. | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.422 |
| Lbir_0265 | proP6 | Lbir_0265 | Lbir_0266 | Hypothetical protein. | Proline/betaine transporter ProP6. | 0.422 |
| Lbir_0268 | Lbir_0265 | Lbir_0268 | Lbir_0265 | Putative FlgJ-like protein. | Hypothetical protein. | 0.422 |
| Lbir_0268 | Lbir_0269 | Lbir_0268 | Lbir_0269 | Putative FlgJ-like protein. | Transcription factor. | 0.786 |
| Lbir_0268 | def_4 | Lbir_0268 | Lbir_0267 | Putative FlgJ-like protein. | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.805 |
| Lbir_0268 | proP6 | Lbir_0268 | Lbir_0266 | Putative FlgJ-like protein. | Proline/betaine transporter ProP6. | 0.805 |
| Lbir_0269 | Lbir_0265 | Lbir_0269 | Lbir_0265 | Transcription factor. | Hypothetical protein. | 0.412 |
| Lbir_0269 | Lbir_0268 | Lbir_0269 | Lbir_0268 | Transcription factor. | Putative FlgJ-like protein. | 0.786 |
| Lbir_0269 | def_4 | Lbir_0269 | Lbir_0267 | Transcription factor. | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.786 |
| Lbir_0269 | proP6 | Lbir_0269 | Lbir_0266 | Transcription factor. | Proline/betaine transporter ProP6. | 0.786 |
| def_4 | Lbir_0265 | Lbir_0267 | Lbir_0265 | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Hypothetical protein. | 0.422 |
| def_4 | Lbir_0268 | Lbir_0267 | Lbir_0268 | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Putative FlgJ-like protein. | 0.805 |
| def_4 | Lbir_0269 | Lbir_0267 | Lbir_0269 | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Transcription factor. | 0.786 |
| def_4 | proP6 | Lbir_0267 | Lbir_0266 | Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Proline/betaine transporter ProP6. | 0.805 |
| proP6 | Lbir_0265 | Lbir_0266 | Lbir_0265 | Proline/betaine transporter ProP6. | Hypothetical protein. | 0.422 |
| proP6 | Lbir_0268 | Lbir_0266 | Lbir_0268 | Proline/betaine transporter ProP6. | Putative FlgJ-like protein. | 0.805 |
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