Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lbir_1467 | Lbir_1982 | Lbir_1467 | Lbir_1982 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
Lbir_1467 | arcB_1 | Lbir_1467 | Lbir_1159 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
Lbir_1467 | arcB_2 | Lbir_1467 | Lbir_0108 | Sensory histidine-kinase / response regulator. | Sensory box histidine kinase/response regulator. | 0.999 |
Lbir_1467 | arcB_3 | Lbir_1467 | Lbir_3051 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
Lbir_1467 | arcB_4 | Lbir_1467 | Lbir_3065 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
Lbir_1467 | arcB_6 | Lbir_1467 | Lbir_1966 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
Lbir_1467 | bvgS | Lbir_1467 | Lbir_3064 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
Lbir_1467 | divK | Lbir_1467 | Lbir_1040 | Sensory histidine-kinase / response regulator. | Sensory box histidine kinase/response regulator. | 0.999 |
Lbir_1467 | gacS/letS | Lbir_1467 | Lbir_1596 | Sensory histidine-kinase / response regulator. | Transmission sensor LetS. | 0.999 |
Lbir_1467 | uvrY | Lbir_1467 | Lbir_0756 | Sensory histidine-kinase / response regulator. | Response regulator GacA. | 0.982 |
Lbir_1982 | Lbir_1467 | Lbir_1982 | Lbir_1467 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
Lbir_1982 | arcB_1 | Lbir_1982 | Lbir_1159 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
Lbir_1982 | arcB_2 | Lbir_1982 | Lbir_0108 | Sensory histidine-kinase / response regulator. | Sensory box histidine kinase/response regulator. | 0.999 |
Lbir_1982 | arcB_3 | Lbir_1982 | Lbir_3051 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
Lbir_1982 | arcB_4 | Lbir_1982 | Lbir_3065 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
Lbir_1982 | arcB_6 | Lbir_1982 | Lbir_1966 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
Lbir_1982 | bvgS | Lbir_1982 | Lbir_3064 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
Lbir_1982 | divK | Lbir_1982 | Lbir_1040 | Sensory histidine-kinase / response regulator. | Sensory box histidine kinase/response regulator. | 0.999 |
Lbir_1982 | gacS/letS | Lbir_1982 | Lbir_1596 | Sensory histidine-kinase / response regulator. | Transmission sensor LetS. | 0.999 |
Lbir_1982 | uvrY | Lbir_1982 | Lbir_0756 | Sensory histidine-kinase / response regulator. | Response regulator GacA. | 0.990 |
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