Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lbir_0968 | Lbir_0969 | Lbir_0968 | Lbir_0969 | Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family. | Serine protein kinase. | 0.995 |
Lbir_0968 | pepN | Lbir_0968 | Lbir_0970 | Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family. | Aminopeptidase. | 0.468 |
Lbir_0968 | phoH | Lbir_0968 | Lbir_1808 | Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family. | Phosphate starvation inducible protein PhnH. | 0.623 |
Lbir_0968 | spo | Lbir_0968 | Lbir_0967 | Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family. | SpoVR family protein. | 0.997 |
Lbir_0969 | Lbir_0968 | Lbir_0969 | Lbir_0968 | Serine protein kinase. | Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family. | 0.995 |
Lbir_0969 | pepN | Lbir_0969 | Lbir_0970 | Serine protein kinase. | Aminopeptidase. | 0.550 |
Lbir_0969 | phoH | Lbir_0969 | Lbir_1808 | Serine protein kinase. | Phosphate starvation inducible protein PhnH. | 0.627 |
Lbir_0969 | spo | Lbir_0969 | Lbir_0967 | Serine protein kinase. | SpoVR family protein. | 0.995 |
pepN | Lbir_0968 | Lbir_0970 | Lbir_0968 | Aminopeptidase. | Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family. | 0.468 |
pepN | Lbir_0969 | Lbir_0970 | Lbir_0969 | Aminopeptidase. | Serine protein kinase. | 0.550 |
pepN | spo | Lbir_0970 | Lbir_0967 | Aminopeptidase. | SpoVR family protein. | 0.468 |
phoH | Lbir_0968 | Lbir_1808 | Lbir_0968 | Phosphate starvation inducible protein PhnH. | Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family. | 0.623 |
phoH | Lbir_0969 | Lbir_1808 | Lbir_0969 | Phosphate starvation inducible protein PhnH. | Serine protein kinase. | 0.627 |
phoH | spo | Lbir_1808 | Lbir_0967 | Phosphate starvation inducible protein PhnH. | SpoVR family protein. | 0.459 |
spo | Lbir_0968 | Lbir_0967 | Lbir_0968 | SpoVR family protein. | Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family. | 0.997 |
spo | Lbir_0969 | Lbir_0967 | Lbir_0969 | SpoVR family protein. | Serine protein kinase. | 0.995 |
spo | pepN | Lbir_0967 | Lbir_0970 | SpoVR family protein. | Aminopeptidase. | 0.468 |
spo | phoH | Lbir_0967 | Lbir_1808 | SpoVR family protein. | Phosphate starvation inducible protein PhnH. | 0.459 |