Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lbir_1990Type IV fimbrial biogenesis PilY1-like protein. (1091 aa)    
Predicted Functional Partners:
Lbir_1991
Hypothetical protein.
     0.994
pilX
Tfp pilus assembly protein PilX.
 
  
 0.992
pilW
Type IV fimbrial biogenesis PilW-like protein.
 
  
 0.992
pilV
Type IV fimbrial biogenesis protein PilV.
 
  
 0.990
pilE
type-IV pilin.
 
  
 0.946
fimT
Type IV pre-pilin.
 
  
 0.907
pilO
Tfp pilus assembly protein PilO.
  
  
 0.810
pilN
Tfp pilus assembly protein PilN.
 
  
 0.805
Lbir_0190
Type IV pilus biogenesis protein PilP.
  
  
 0.793
pilM
Tfp pilus assembly protein, ATPase PilM.
 
   
 0.765
Your Current Organism:
Legionella birminghamensis
NCBI taxonomy Id: 28083
Other names: ATCC 43702, CCUG 31233, CCUG 31233 A, CIP 103871, DSM 19232, JCM 7559, L. birminghamensis, NCTC 12437
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.