Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xynDPolysaccharide deacetylase. (275 aa)    
Predicted Functional Partners:
Lbir_2007
Cupin.
       0.756
dotG_2
IcmE/DotG protein.
  
     0.671
Lbir_2714
IcmJ protein.
  
     0.557
Lbir_0493
Protein-tyrosine phosphatase.
  
     0.542
dotC
Defect in organelle trafficking lipoprotein DotC.
  
     0.541
dotA
Defect in organelle trafficking protein DotA.
  
     0.540
enhA_1
Enhanced entry protein EnhA.
  
     0.530
Lbir_1273
Hypothetical protein.
  
     0.524
Lbir_2247
Cysteine protease.
  
     0.524
enhA_3
Enhanced entry protein EnhA.
  
     0.510
Your Current Organism:
Legionella birminghamensis
NCBI taxonomy Id: 28083
Other names: ATCC 43702, CCUG 31233, CCUG 31233 A, CIP 103871, DSM 19232, JCM 7559, L. birminghamensis, NCTC 12437
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.