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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyaA_2Guanylate cyclase. (742 aa)    
Predicted Functional Partners:
phoR
Sensory box histidine kinase/response regulator.
 
 0.956
Lbir_2243
Cyclic nucleotide-binding protein.
 
 
 0.948
Lbir_2466
FecR protein.
 
     0.938
rpfG
Metal dependent phosphohydrolase.
 
  
 0.930
Lbir_0480
cNMP binding domain-containing protein.
 
 
 0.906
ynaI
Sulfate permease with a cNMP binding motif protein.
 
 
 0.892
Lbir_2622
Sensory box/GGDEF family protein.
 
 0.886
Lbir_2437
Cyclic nucleotide-binding domain protein.
 
 
 0.878
rssA_1
Patatin-like phospholipase.
   
 0.862
arcB_2
Sensory box histidine kinase/response regulator.
  
 0.859
Your Current Organism:
Legionella birminghamensis
NCBI taxonomy Id: 28083
Other names: ATCC 43702, CCUG 31233, CCUG 31233 A, CIP 103871, DSM 19232, JCM 7559, L. birminghamensis, NCTC 12437
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