Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
tfdBFAD monooxygenase. (540 aa)    
Predicted Functional Partners:
Lbir_2576
Hypothetical protein.
       0.723
Lbir_2574
Hypothetical protein.
       0.718
Lbir_0966
Cytochrome P450.
  
  0.649
cocE_1
Cocaine esterase.
  
     0.603
egl
Endoglucanase precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.588
tcmN_2
O-methyltransferase.
  
     0.552
pbpE
Beta-lactamase.
 
     0.543
Lbir_1911
Glycosyl transferase family 2.
  
 
   0.531
ubiG_1
3-demethylubiquinone-9 3-methyltransferase.
    
  0.526
tpm
Thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.
    
  0.526
Your Current Organism:
Legionella birminghamensis
NCBI taxonomy Id: 28083
Other names: ATCC 43702, CCUG 31233, CCUG 31233 A, CIP 103871, DSM 19232, JCM 7559, L. birminghamensis, NCTC 12437
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