pleD protein (Legionella cherrii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

pleD

Sensor histidine kinase. (158 aa)

Predicted Functional Partners:

Cph2_4

0.863

Cph2_5

0.863

YcgG_1

0.825

YcgG_2

0.823

Cph2_2

0.821

Lche_0833

0.821

Lche_0067

0.819

RpfG_2

0.778

RpfG_1

0.721

CyaB_1

0.705

Your Current Organism:

Legionella cherrii

NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cph2_2	Cph2_4	Lche_0507	Lche_0286	Inner membrane protein/sensory box protein LssE.	Regulatory protein (GGDEF and EAL domains).	0.963
Cph2_2	Cph2_5	Lche_0507	Lche_0798	Inner membrane protein/sensory box protein LssE.	Regulatory protein (GGDEF and EAL domains).	0.962
Cph2_2	CyaB_1	Lche_0507	Lche_3041	Inner membrane protein/sensory box protein LssE.	Guanylate/adenylate cyclase.	0.670
Cph2_2	RpfG_1	Lche_0507	Lche_0542	Inner membrane protein/sensory box protein LssE.	Sensory protein (PAS domain).	0.643
Cph2_2	RpfG_2	Lche_0507	Lche_1664	Inner membrane protein/sensory box protein LssE.	Metal dependent phosphohydrolase.	0.648
Cph2_2	YcgG_1	Lche_0507	Lche_2677	Inner membrane protein/sensory box protein LssE.	Signal transduction protein (EAL/GGDEF domain protein).	0.483
Cph2_2	YcgG_2	Lche_0507	Lche_1681	Inner membrane protein/sensory box protein LssE.	Regulatory protein (EAL domain).	0.478
Cph2_2	pleD	Lche_0507	Lche_0066	Inner membrane protein/sensory box protein LssE.	Sensor histidine kinase.	0.821
Cph2_4	Cph2_2	Lche_0286	Lche_0507	Regulatory protein (GGDEF and EAL domains).	Inner membrane protein/sensory box protein LssE.	0.963
Cph2_4	Cph2_5	Lche_0286	Lche_0798	Regulatory protein (GGDEF and EAL domains).	Regulatory protein (GGDEF and EAL domains).	0.991
Cph2_4	CyaB_1	Lche_0286	Lche_3041	Regulatory protein (GGDEF and EAL domains).	Guanylate/adenylate cyclase.	0.964
Cph2_4	Lche_0833	Lche_0286	Lche_0833	Regulatory protein (GGDEF and EAL domains).	Regulatory protein (GGDEF and EAL domains).	0.706
Cph2_4	RpfG_1	Lche_0286	Lche_0542	Regulatory protein (GGDEF and EAL domains).	Sensory protein (PAS domain).	0.868
Cph2_4	RpfG_2	Lche_0286	Lche_1664	Regulatory protein (GGDEF and EAL domains).	Metal dependent phosphohydrolase.	0.880
Cph2_4	YcgG_1	Lche_0286	Lche_2677	Regulatory protein (GGDEF and EAL domains).	Signal transduction protein (EAL/GGDEF domain protein).	0.651
Cph2_4	YcgG_2	Lche_0286	Lche_1681	Regulatory protein (GGDEF and EAL domains).	Regulatory protein (EAL domain).	0.653
Cph2_4	pleD	Lche_0286	Lche_0066	Regulatory protein (GGDEF and EAL domains).	Sensor histidine kinase.	0.863
Cph2_5	Cph2_2	Lche_0798	Lche_0507	Regulatory protein (GGDEF and EAL domains).	Inner membrane protein/sensory box protein LssE.	0.962
Cph2_5	Cph2_4	Lche_0798	Lche_0286	Regulatory protein (GGDEF and EAL domains).	Regulatory protein (GGDEF and EAL domains).	0.991
Cph2_5	CyaB_1	Lche_0798	Lche_3041	Regulatory protein (GGDEF and EAL domains).	Guanylate/adenylate cyclase.	0.963