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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_0071Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. (260 aa)    
Predicted Functional Partners:
Lche_0073
GNAT family acetyltransferase.
 
   
 0.940
Lche_0075
ATPase.
 
     0.937
Lche_0077
Putative secreted esterase.
 
     0.845
Lche_0070
Multidrug resistance ABC transporter ATP binding protein.
 
     0.841
uup_1
ABC transporter ATP-binding protein Uup.
 
     0.838
grpB
Glutamate rich protein GrpB.
 
     0.834
Lche_0079
Cell division protein FtsI/penicillin-binding protein 2.
 
     0.809
Lche_0074
Hypothetical protein.
       0.800
Lche_0084
5' DNA primase TraC.
 
     0.789
Lche_0168
Putative conjugative transfer protein TraI.
 
     0.777
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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