STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
grpBGlutamate rich protein GrpB. (318 aa)    
Predicted Functional Partners:
Lche_0073
GNAT family acetyltransferase.
 
    0.903
Lche_0071
Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
 
     0.865
Lche_0074
Hypothetical protein.
 
     0.857
Lche_0070
Multidrug resistance ABC transporter ATP binding protein.
       0.838
Lche_0075
ATPase.
 
     0.838
uup_1
ABC transporter ATP-binding protein Uup.
 
     0.821
Lche_0076
MerR family transcriptional regulator.
 
     0.753
aph
Spectinomycin phosphotransferase.
 
     0.715
Lche_0310
GNAT family acetyltransferase.
 
    0.705
Lche_2914
N-acetyltransferase GCN5.
 
     0.684
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.