Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lche_0077 | Lche_0079 | Lche_0077 | Lche_0079 | Putative secreted esterase. | Cell division protein FtsI/penicillin-binding protein 2. | 0.876 |
Lche_0077 | Lche_0080 | Lche_0077 | Lche_0080 | Putative secreted esterase. | Beta-lactamase AmpS. | 0.483 |
Lche_0077 | Lche_0081 | Lche_0077 | Lche_0081 | Putative secreted esterase. | Polysaccharide deacetylase. | 0.854 |
Lche_0077 | Lche_0083 | Lche_0077 | Lche_0083 | Putative secreted esterase. | Methyltransferase. | 0.522 |
Lche_0077 | Lche_0860 | Lche_0077 | Lche_0860 | Putative secreted esterase. | Eukaryotic small stress protein PASS1. | 0.747 |
Lche_0077 | Lche_1117 | Lche_0077 | Lche_1117 | Putative secreted esterase. | Choline kinase. | 0.774 |
Lche_0077 | Lche_2052 | Lche_0077 | Lche_2052 | Putative secreted esterase. | Hypothetical protein. | 0.623 |
Lche_0077 | Lche_2862 | Lche_0077 | Lche_2862 | Putative secreted esterase. | Eukaryotic small stress protein PASS1. | 0.742 |
Lche_0077 | besA | Lche_0077 | Lche_0082 | Putative secreted esterase. | Ferri-bacillibactin esterase BesA. | 0.858 |
Lche_0077 | mecI | Lche_0077 | Lche_0078 | Putative secreted esterase. | Methicillin resistance regulatory protein MecI. | 0.656 |
Lche_0079 | Lche_0077 | Lche_0079 | Lche_0077 | Cell division protein FtsI/penicillin-binding protein 2. | Putative secreted esterase. | 0.876 |
Lche_0079 | Lche_0080 | Lche_0079 | Lche_0080 | Cell division protein FtsI/penicillin-binding protein 2. | Beta-lactamase AmpS. | 0.666 |
Lche_0079 | Lche_0081 | Lche_0079 | Lche_0081 | Cell division protein FtsI/penicillin-binding protein 2. | Polysaccharide deacetylase. | 0.877 |
Lche_0079 | Lche_0083 | Lche_0079 | Lche_0083 | Cell division protein FtsI/penicillin-binding protein 2. | Methyltransferase. | 0.620 |
Lche_0079 | Lche_0860 | Lche_0079 | Lche_0860 | Cell division protein FtsI/penicillin-binding protein 2. | Eukaryotic small stress protein PASS1. | 0.702 |
Lche_0079 | Lche_1117 | Lche_0079 | Lche_1117 | Cell division protein FtsI/penicillin-binding protein 2. | Choline kinase. | 0.772 |
Lche_0079 | Lche_2862 | Lche_0079 | Lche_2862 | Cell division protein FtsI/penicillin-binding protein 2. | Eukaryotic small stress protein PASS1. | 0.712 |
Lche_0079 | besA | Lche_0079 | Lche_0082 | Cell division protein FtsI/penicillin-binding protein 2. | Ferri-bacillibactin esterase BesA. | 0.797 |
Lche_0079 | mecI | Lche_0079 | Lche_0078 | Cell division protein FtsI/penicillin-binding protein 2. | Methicillin resistance regulatory protein MecI. | 0.846 |
Lche_0080 | Lche_0077 | Lche_0080 | Lche_0077 | Beta-lactamase AmpS. | Putative secreted esterase. | 0.483 |
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