STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_0111Putative aminoglycoside phosphotransferase. (337 aa)    
Predicted Functional Partners:
Lche_0112
N-acetyltransferase GCN5.
 
     0.937
Lche_0114
N-acetyltransferase GCN5.
 
     0.903
Lche_0113
Aminoalkylphosphonic acid N-acetyltransferase.
 
     0.874
Lche_0117
Methyltransferase.
 
     0.824
Lche_0118
GNAT family acetyltransferase.
 
    0.809
Lche_0115
Hypothetical protein.
       0.800
Lche_0099
Phosphotransferase enzyme family protein.
 
 
   0.784
Lche_0106
Phosphotransferase enzyme family protein.
 
 
   0.784
Lche_0108
D12 class N6 adenine-specific DNA methyltransferase.
  
     0.757
Lche_0127
Aminoglycoside 6'-N-acetyltransferase.
  
     0.752
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.