Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lche_0111 | Lche_0112 | Lche_0111 | Lche_0112 | Putative aminoglycoside phosphotransferase. | N-acetyltransferase GCN5. | 0.937 |
Lche_0111 | Lche_0113 | Lche_0111 | Lche_0113 | Putative aminoglycoside phosphotransferase. | Aminoalkylphosphonic acid N-acetyltransferase. | 0.874 |
Lche_0111 | Lche_0114 | Lche_0111 | Lche_0114 | Putative aminoglycoside phosphotransferase. | N-acetyltransferase GCN5. | 0.903 |
Lche_0111 | Lche_0115 | Lche_0111 | Lche_0115 | Putative aminoglycoside phosphotransferase. | Hypothetical protein. | 0.800 |
Lche_0111 | Lche_0116 | Lche_0111 | Lche_0116 | Putative aminoglycoside phosphotransferase. | Muramoyltetrapeptide carboxypeptidase. | 0.635 |
Lche_0111 | Lche_0117 | Lche_0111 | Lche_0117 | Putative aminoglycoside phosphotransferase. | Methyltransferase. | 0.824 |
Lche_0111 | Lche_0118 | Lche_0111 | Lche_0118 | Putative aminoglycoside phosphotransferase. | GNAT family acetyltransferase. | 0.809 |
Lche_0111 | Lche_0119 | Lche_0111 | Lche_0119 | Putative aminoglycoside phosphotransferase. | Hypothetical protein. | 0.719 |
Lche_0111 | yueD_1 | Lche_0111 | Lche_0110 | Putative aminoglycoside phosphotransferase. | Sepiapterin reductase. | 0.643 |
Lche_0112 | Lche_0111 | Lche_0112 | Lche_0111 | N-acetyltransferase GCN5. | Putative aminoglycoside phosphotransferase. | 0.937 |
Lche_0112 | Lche_0113 | Lche_0112 | Lche_0113 | N-acetyltransferase GCN5. | Aminoalkylphosphonic acid N-acetyltransferase. | 0.898 |
Lche_0112 | Lche_0114 | Lche_0112 | Lche_0114 | N-acetyltransferase GCN5. | N-acetyltransferase GCN5. | 0.850 |
Lche_0112 | Lche_0115 | Lche_0112 | Lche_0115 | N-acetyltransferase GCN5. | Hypothetical protein. | 0.800 |
Lche_0112 | Lche_0116 | Lche_0112 | Lche_0116 | N-acetyltransferase GCN5. | Muramoyltetrapeptide carboxypeptidase. | 0.630 |
Lche_0112 | Lche_0117 | Lche_0112 | Lche_0117 | N-acetyltransferase GCN5. | Methyltransferase. | 0.890 |
Lche_0112 | Lche_0118 | Lche_0112 | Lche_0118 | N-acetyltransferase GCN5. | GNAT family acetyltransferase. | 0.777 |
Lche_0112 | Lche_0119 | Lche_0112 | Lche_0119 | N-acetyltransferase GCN5. | Hypothetical protein. | 0.669 |
Lche_0112 | yueD_1 | Lche_0112 | Lche_0110 | N-acetyltransferase GCN5. | Sepiapterin reductase. | 0.616 |
Lche_0113 | Lche_0111 | Lche_0113 | Lche_0111 | Aminoalkylphosphonic acid N-acetyltransferase. | Putative aminoglycoside phosphotransferase. | 0.874 |
Lche_0113 | Lche_0112 | Lche_0113 | Lche_0112 | Aminoalkylphosphonic acid N-acetyltransferase. | N-acetyltransferase GCN5. | 0.898 |
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