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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_0127Aminoglycoside 6'-N-acetyltransferase. (378 aa)    
Predicted Functional Partners:
Lche_0125
Homoserine kinase.
 
     0.943
Lche_0128
Topology modulation protein.
 
     0.847
Lche_0106
Phosphotransferase enzyme family protein.
  
 
   0.799
recX-2
Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family.
 
     0.793
Lche_0099
Phosphotransferase enzyme family protein.
  
 
   0.786
Lche_0168
Putative conjugative transfer protein TraI.
  
    0.779
Lche_2250
NHL repeat protein.
  
    0.777
Lche_0077
Putative secreted esterase.
  
     0.773
Lche_0108
D12 class N6 adenine-specific DNA methyltransferase.
 
     0.773
Lche_0126
Acetyltransferase.
       0.773
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
Server load: medium (50%) [HD]
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