STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
uptCType II secretion system protein. (368 aa)    
Predicted Functional Partners:
pilD
Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
   
 0.868
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
  
  
 0.835
pilC
Pilus assembly protein PilC.
 
   
 0.828
lspF
Type II secretory pathway protein LspF.
 
   
 0.790
ankK
Substrate of the Dot/Icm secretion system.
       0.753
pilO
Tfp pilus assembly protein PilO.
 
  
 0.726
pilN
Tfp pilus assembly protein PilN.
  
  
 0.714
pilP
Tfp pilus assembly protein PilP.
  
   
 0.608
pilZ_1
Type 4 fimbrial biogenesis protein PilZ.
  
  
 0.499
Lche_2423
Recombinase B.
       0.496
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
Server load: medium (48%) [HD]