Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BepE_1 | BepE_2 | Lche_3311 | Lche_0968 | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.903 |
BepE_1 | MacA_2 | Lche_3311 | Lche_0283 | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.643 |
BepE_1 | ceaB | Lche_3311 | Lche_2196 | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Chemiosmotic efflux system protein B-like protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.676 |
BepE_1 | lmxE | Lche_3311 | Lche_2951 | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.718 |
BepE_2 | BepE_1 | Lche_0968 | Lche_3311 | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.903 |
BepE_2 | MacA_2 | Lche_0968 | Lche_0283 | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.662 |
BepE_2 | ceaB | Lche_0968 | Lche_2196 | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Chemiosmotic efflux system protein B-like protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.711 |
BepE_2 | lmxE | Lche_0968 | Lche_2951 | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.741 |
CzcA_1 | Lche_0285 | Lche_0284 | Lche_0285 | Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Ion channel. | 0.567 |
CzcA_1 | MacA_2 | Lche_0284 | Lche_0283 | Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.968 |
CzcA_1 | ceaB | Lche_0284 | Lche_2196 | Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Chemiosmotic efflux system protein B-like protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.605 |
CzcA_1 | lmxE | Lche_0284 | Lche_2951 | Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.591 |
Lche_0285 | CzcA_1 | Lche_0285 | Lche_0284 | Ion channel. | Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.567 |
Lche_0285 | MacA_2 | Lche_0285 | Lche_0283 | Ion channel. | Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.561 |
MacA_2 | BepE_1 | Lche_0283 | Lche_3311 | Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.643 |
MacA_2 | BepE_2 | Lche_0283 | Lche_0968 | Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.662 |
MacA_2 | CzcA_1 | Lche_0283 | Lche_0284 | Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.968 |
MacA_2 | Lche_0285 | Lche_0283 | Lche_0285 | Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Ion channel. | 0.561 |
MacA_2 | MacB_2 | Lche_0283 | Lche_2833 | Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | ABC transporter permease. | 0.519 |
MacA_2 | ceaB | Lche_0283 | Lche_2196 | Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Chemiosmotic efflux system protein B-like protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.631 |
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