Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lche_0309Photosystem I assembly protein Ycf3. (375 aa)    
Predicted Functional Partners:
Lche_0709
Ankyrin repeat protein.
  
  0.734
legA
Ankyrin-repeat containing protein, substrate of the Dot/Icm secretion system.
  
  0.715
bcsA
Cellulose synthase catalytic subunit; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.
  
 
 0.699
Lche_0801
Hypothetical protein.
   
 
 0.665
Lche_0830
Hypothetical protein.
  
     0.665
Lche_2685
Leucine-rich repeat-containing protein (substrate of the Dot/Icm secretion system).
  
  0.664
Lche_0522
Protein phosphatase 2C.
  
 
   0.655
map_1
Major acid phosphatase Map (histidine-acid phosphatase).
  
     0.644
Lche_1870
Leucine Rich repeats (2 copies).
  
     0.639
Lche_0335
Ankyrin repeats (3 copies).
  
  0.570
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.