Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ChiD | Lche_0252 | Lche_2313 | Lche_0252 | Chitinase. | L-gulono-gamma-lactone oxidase. | 0.751 |
ChiD | Lche_0316 | Lche_2313 | Lche_0316 | Chitinase. | Hypothetical protein. | 0.734 |
ChiD | Lche_0326 | Lche_2313 | Lche_0326 | Chitinase. | Phosphotransferase enzyme family protein. | 0.669 |
ChiD | Lche_0535 | Lche_2313 | Lche_0535 | Chitinase. | Hypothetical protein. | 0.758 |
ChiD | Lche_0544 | Lche_2313 | Lche_0544 | Chitinase. | Calcium-transporting ATPase. | 0.762 |
ChiD | Lche_0926 | Lche_2313 | Lche_0926 | Chitinase. | Chloramphenicol phosphotransferase-like protein. | 0.722 |
ChiD | Lche_1570 | Lche_2313 | Lche_1570 | Chitinase. | Hypothetical protein. | 0.610 |
ChiD | Lche_2120 | Lche_2313 | Lche_2120 | Chitinase. | Major facilitator family transporter. | 0.756 |
ChiD | Lche_2502 | Lche_2313 | Lche_2502 | Chitinase. | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | 0.756 |
ChiD | Lche_3036 | Lche_2313 | Lche_3036 | Chitinase. | Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.872 |
Lche_0252 | ChiD | Lche_0252 | Lche_2313 | L-gulono-gamma-lactone oxidase. | Chitinase. | 0.751 |
Lche_0252 | Lche_0316 | Lche_0252 | Lche_0316 | L-gulono-gamma-lactone oxidase. | Hypothetical protein. | 0.771 |
Lche_0252 | Lche_0326 | Lche_0252 | Lche_0326 | L-gulono-gamma-lactone oxidase. | Phosphotransferase enzyme family protein. | 0.628 |
Lche_0252 | Lche_0535 | Lche_0252 | Lche_0535 | L-gulono-gamma-lactone oxidase. | Hypothetical protein. | 0.452 |
Lche_0252 | Lche_0544 | Lche_0252 | Lche_0544 | L-gulono-gamma-lactone oxidase. | Calcium-transporting ATPase. | 0.784 |
Lche_0252 | Lche_0926 | Lche_0252 | Lche_0926 | L-gulono-gamma-lactone oxidase. | Chloramphenicol phosphotransferase-like protein. | 0.750 |
Lche_0252 | Lche_1570 | Lche_0252 | Lche_1570 | L-gulono-gamma-lactone oxidase. | Hypothetical protein. | 0.643 |
Lche_0252 | Lche_2120 | Lche_0252 | Lche_2120 | L-gulono-gamma-lactone oxidase. | Major facilitator family transporter. | 0.773 |
Lche_0252 | Lche_2502 | Lche_0252 | Lche_2502 | L-gulono-gamma-lactone oxidase. | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. | 0.773 |
Lche_0252 | Lche_3036 | Lche_0252 | Lche_3036 | L-gulono-gamma-lactone oxidase. | Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.774 |
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