STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lche_0327NHL repeat protein. (475 aa)    
Predicted Functional Partners:
ftsK
DNA translocase FtsK.
   
 
 0.818
Pcp_2
Serine protease, subtilase family.
     
 0.775
pepO
Metallopeptidase PepO, peptidase, M13 family.
  
    0.621
AprX
Subtilisin-like serine protease.
 
 
 0.550
Lche_0326
Phosphotransferase enzyme family protein.
       0.539
BprV
Serine protease; Belongs to the peptidase S8 family.
  
 
 0.458
pksJ_1
Polyketide synthase, type I.
  
 
 0.416
Lche_1834
acyl-CoA synthetase.
  
 
 0.416
Lche_2715
acyl-CoA synthetase.
  
 
 0.416
LuxQ_2
Sensory histidine-kinase / response regulator.
 
 
 
 0.407
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.