Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EchA8 | etfA | Lche_1052 | Lche_1025 | enoyl-CoA hydratase. | Electron transfer flavoprotein, alpha subunit. | 0.406 |
EchA8 | fadA | Lche_1052 | Lche_1359 | enoyl-CoA hydratase. | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.786 |
EchA8 | fadB | Lche_1052 | Lche_1358 | enoyl-CoA hydratase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.924 |
EchA8 | fadE_1 | Lche_1052 | Lche_1415 | enoyl-CoA hydratase. | Acyl coenzyme A dehydrogenase. | 0.951 |
EchA8 | fadE_2 | Lche_1052 | Lche_2542 | enoyl-CoA hydratase. | Acyl coenzyme A dehydrogenase. | 0.951 |
EchA8 | gcdH | Lche_1052 | Lche_0366 | enoyl-CoA hydratase. | glutaryl-CoA dehydrogenase. | 0.962 |
EchA8 | paaF | Lche_1052 | Lche_1051 | enoyl-CoA hydratase. | enoyl-CoA hydratase. | 0.987 |
EchA8 | yfcX | Lche_1052 | Lche_1464 | enoyl-CoA hydratase. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.930 |
etfA | EchA8 | Lche_1025 | Lche_1052 | Electron transfer flavoprotein, alpha subunit. | enoyl-CoA hydratase. | 0.406 |
etfA | fadB | Lche_1025 | Lche_1358 | Electron transfer flavoprotein, alpha subunit. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.814 |
etfA | fadE_1 | Lche_1025 | Lche_1415 | Electron transfer flavoprotein, alpha subunit. | Acyl coenzyme A dehydrogenase. | 0.833 |
etfA | fadE_2 | Lche_1025 | Lche_2542 | Electron transfer flavoprotein, alpha subunit. | Acyl coenzyme A dehydrogenase. | 0.833 |
etfA | gcdH | Lche_1025 | Lche_0366 | Electron transfer flavoprotein, alpha subunit. | glutaryl-CoA dehydrogenase. | 0.946 |
etfA | paaF | Lche_1025 | Lche_1051 | Electron transfer flavoprotein, alpha subunit. | enoyl-CoA hydratase. | 0.533 |
etfA | yfcX | Lche_1025 | Lche_1464 | Electron transfer flavoprotein, alpha subunit. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.814 |
fadA | EchA8 | Lche_1359 | Lche_1052 | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | enoyl-CoA hydratase. | 0.786 |
fadA | fadB | Lche_1359 | Lche_1358 | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.999 |
fadA | fadE_1 | Lche_1359 | Lche_1415 | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Acyl coenzyme A dehydrogenase. | 0.954 |
fadA | fadE_2 | Lche_1359 | Lche_2542 | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Acyl coenzyme A dehydrogenase. | 0.955 |
fadA | gcdH | Lche_1359 | Lche_0366 | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | glutaryl-CoA dehydrogenase. | 0.952 |
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