STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lche_0384Alpha-beta hydrolase family transporter esterase. (387 aa)    
Predicted Functional Partners:
adc
Acetoacetate decarboxylase; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family.
 
   
 0.953
BdhA
3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
   0.934
motA2
Flagellar motor protein MotA.
       0.809
motB_1
Flagellar motor protein MotB.
       0.799
Lche_2183
Hypothetical protein.
 
   
 0.594
Lche_0382
Hypothetical protein.
     
 0.530
ndh
Respiratory NADH dehydrogenase 2/cupric reductase.
     
 0.521
fimV_2
Transmembrane Tfp pilus assembly protein FimV.
  
     0.498
phbC_3
PHA synthase.
 
   
 0.486
phbC_2
Polyhydroxyalkanoic synthase.
 
   
 0.483
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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