STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MrgA_1DNA-binding protein; Belongs to the Dps family. (144 aa)    
Predicted Functional Partners:
clpS
Regulatory protein for ClpA substrate specificity; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.870
sdaC
Serine transporter.
    
   0.768
OhrB
Organic hydroperoxide resistance protein.
  
  
 0.670
wrbA
Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.
  
  
 0.657
Lche_3205
Serine protein kinase.
   
    0.638
Lche_1573
Sigma 54 modulation protein YhbH.
  
  
 0.625
bolA
Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family.
   
  
 0.612
Lche_0355
Putative Antitoxin higA-2.
   
    0.591
yhbH
Ribosome-associated, sigma 54 modulation protein.
   
    0.512
CopA_1
Cation transport ATPase.
  
  
 0.506
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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