STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
icmVIntracellular multiplication protein IcmV. (150 aa)    
Predicted Functional Partners:
icmX
Intracellular multiplication protein IcmX.
     
 0.899
icmW
Intracellular multiplication protein IcmW.
     
 0.898
Lche_0482
IcmF.
      
 0.862
Lche_0483
IcmH (DotU).
      
 0.862
dotA
Defect in organelle trafficking protein DotA.
     
 0.839
ankD
Substrate of the Dot/Icm secretion system.
       0.734
tolC
Outer membrane protein TolC.
      
 0.665
icmM
IcmM (DotJ).
      
 0.632
Lche_0629
Protein IcmL (DotI).
      
 0.614
Lche_0624
IcmQ protein.
      
 0.612
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.