Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EptA | dgkA | Lche_1428 | Lche_0520 | Sulfatase. | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | 0.402 |
Lche_0521 | MgtA_1 | Lche_0521 | Lche_2989 | Saframycin Mx1 synthetase B. | Glycosyltransferase. | 0.468 |
Lche_0521 | dgkA | Lche_0521 | Lche_0520 | Saframycin Mx1 synthetase B. | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | 0.577 |
Lche_0521 | plsC | Lche_0521 | Lche_0461 | Saframycin Mx1 synthetase B. | 1-acyl-sn-glycerol-3-phosphate acetyltransferase. | 0.537 |
Lche_0521 | ybeY | Lche_0521 | Lche_1718 | Saframycin Mx1 synthetase B. | Metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.891 |
MgtA_1 | Lche_0521 | Lche_2989 | Lche_0521 | Glycosyltransferase. | Saframycin Mx1 synthetase B. | 0.468 |
MgtA_1 | dgkA | Lche_2989 | Lche_0520 | Glycosyltransferase. | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | 0.904 |
cdsA | dgkA | Lche_0724 | Lche_0520 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | 0.918 |
cdsA | era | Lche_0724 | Lche_2007 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.467 |
cdsA | gpsA | Lche_0724 | Lche_0246 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Glycerol-3-phosphate dehydrogenase (NAD+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.438 |
cdsA | plsC | Lche_0724 | Lche_0461 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 1-acyl-sn-glycerol-3-phosphate acetyltransferase. | 0.933 |
dgkA | EptA | Lche_0520 | Lche_1428 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | Sulfatase. | 0.402 |
dgkA | Lche_0521 | Lche_0520 | Lche_0521 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | Saframycin Mx1 synthetase B. | 0.577 |
dgkA | MgtA_1 | Lche_0520 | Lche_2989 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | Glycosyltransferase. | 0.904 |
dgkA | cdsA | Lche_0520 | Lche_0724 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.918 |
dgkA | era | Lche_0520 | Lche_2007 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.446 |
dgkA | glpD | Lche_0520 | Lche_1741 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.802 |
dgkA | gpsA | Lche_0520 | Lche_0246 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | Glycerol-3-phosphate dehydrogenase (NAD+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.837 |
dgkA | plsC | Lche_0520 | Lche_0461 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | 1-acyl-sn-glycerol-3-phosphate acetyltransferase. | 0.903 |
dgkA | recO | Lche_0520 | Lche_2006 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.492 |
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