STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MhpCLipase LipA (L, pneumophila). (276 aa)    
Predicted Functional Partners:
ProP_1
Major facilitator family transporter.
   
   0.779
pksJ_1
Polyketide synthase, type I.
  
 0.732
Lche_1834
acyl-CoA synthetase.
  
 0.732
Lche_2715
acyl-CoA synthetase.
  
 0.732
PksJ_4
Polyketide synthase.
 
 0.599
Lche_0077
Putative secreted esterase.
  
   
 0.514
Lche_0071
Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
  
     0.469
zupT
Dioxygenase.
  
  
 0.462
Lche_2506
acyl-CoA synthetase.
  
 
 0.454
mhpC
Lipolytic enzyme.
  
     0.425
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.