STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TcmNO-methyltransferase. (331 aa)    
Predicted Functional Partners:
yhdE
Septum formation protein; Belongs to the Maf family.
 
 
    0.884
Lche_0992
General secretion pathway protein C.
       0.496
Lche_0993
Sel-1 protein.
       0.496
zupT
Dioxygenase.
       0.460
pksJ_1
Polyketide synthase, type I.
 
 
 
 0.448
PksJ_2
Hypothetical protein.
 
   
 0.436
Kmo
Kynurenine 3-monooxygenase.
  
  
 0.429
mhpC
Lipolytic enzyme.
  
     0.405
Nat
Putative N-hydroxyarylamine O-acetyltransferase.
  
     0.403
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.