STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KmoKynurenine 3-monooxygenase. (446 aa)    
Predicted Functional Partners:
kynU
Kynureninase.
 
 0.981
Lche_0530
Hypothetical protein.
  
   0.709
Lche_0529
Cytokinin oxidase.
  
  
 0.700
Lche_1602
Methyltransferase.
 
 0.538
Cph2_1
Regulatory protein (GGDEF and EAL domains).
       0.496
Lche_1575
Sterol desaturase-related protein.
  
 
 0.450
LagD
Toxin secretion ABC transporter ATP-binding protein.
  
     0.438
TcmN
O-methyltransferase.
  
  
 0.429
ubiB
Ubiquinone biosynthesis protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.
  
 0.423
Lche_1443
Cytochrome P450.
  
 
 0.413
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.