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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_0570Hypothetical protein. (127 aa)    
Predicted Functional Partners:
Lche_1466
Hypothetical protein.
  
     0.624
Lche_2524
Sphingomyelin phosphodiesterase.
  
     0.498
Lche_2544
Chromate transport protein.
  
     0.482
Lche_2821
Hypothetical protein.
  
     0.452
Lche_0569
Hypothetical protein.
       0.451
SecA_2
Coiled-coil protein.
  
     0.445
Lche_2052
Hypothetical protein.
  
     0.439
Lche_1836
Hypothetical protein.
  
     0.428
Lche_2844
Putative DNA-binding protein hemimethylated.
  
     0.422
ankK
Substrate of the Dot/Icm secretion system.
  
     0.418
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.