STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OxyR_2LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (299 aa)    
Predicted Functional Partners:
LysR_3
LysR family transporter transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.726
oxyR
LysR transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.717
DmlR
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.616
CynR
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.582
OxyR_1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.516
AlaS_1
alanyl-tRNA synthetase.
       0.442
ydcN_2
DNA-binding transcriptional regulator.
 
  
 0.430
Lche_0573
Hypothetical protein.
       0.427
CmpR
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.426
Lche_0574
Hypothetical protein.
       0.414
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.