Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AlaS_1 | Lche_0573 | Lche_0572 | Lche_0573 | alanyl-tRNA synthetase. | Hypothetical protein. | 0.746 |
AlaS_1 | Lche_0574 | Lche_0572 | Lche_0574 | alanyl-tRNA synthetase. | Hypothetical protein. | 0.726 |
AlaS_1 | OxyR_2 | Lche_0572 | Lche_0571 | alanyl-tRNA synthetase. | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.442 |
AlaS_1 | ydcN_2 | Lche_0572 | Lche_0575 | alanyl-tRNA synthetase. | DNA-binding transcriptional regulator. | 0.507 |
GltR | OxyR_2 | Lche_3137 | Lche_0571 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.403 |
GltR | ydcN_2 | Lche_3137 | Lche_0575 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | DNA-binding transcriptional regulator. | 0.465 |
Lche_0573 | AlaS_1 | Lche_0573 | Lche_0572 | Hypothetical protein. | alanyl-tRNA synthetase. | 0.746 |
Lche_0573 | Lche_0574 | Lche_0573 | Lche_0574 | Hypothetical protein. | Hypothetical protein. | 0.760 |
Lche_0573 | OxyR_2 | Lche_0573 | Lche_0571 | Hypothetical protein. | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.427 |
Lche_0573 | ydcN_2 | Lche_0573 | Lche_0575 | Hypothetical protein. | DNA-binding transcriptional regulator. | 0.533 |
Lche_0574 | AlaS_1 | Lche_0574 | Lche_0572 | Hypothetical protein. | alanyl-tRNA synthetase. | 0.726 |
Lche_0574 | Lche_0573 | Lche_0574 | Lche_0573 | Hypothetical protein. | Hypothetical protein. | 0.760 |
Lche_0574 | OxyR_2 | Lche_0574 | Lche_0571 | Hypothetical protein. | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.414 |
Lche_0574 | ydcN_2 | Lche_0574 | Lche_0575 | Hypothetical protein. | DNA-binding transcriptional regulator. | 0.625 |
Lche_0576 | ydcN_2 | Lche_0576 | Lche_0575 | Carrier protein. | DNA-binding transcriptional regulator. | 0.454 |
OxyR_2 | AlaS_1 | Lche_0571 | Lche_0572 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | alanyl-tRNA synthetase. | 0.442 |
OxyR_2 | GltR | Lche_0571 | Lche_3137 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.403 |
OxyR_2 | Lche_0573 | Lche_0571 | Lche_0573 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.427 |
OxyR_2 | Lche_0574 | Lche_0571 | Lche_0574 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.414 |
OxyR_2 | ydcN_2 | Lche_0571 | Lche_0575 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | DNA-binding transcriptional regulator. | 0.430 |
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